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mgat4c mgat4 family member C [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117763482, updated on 19-Mar-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
See related
EnsemblRapid:ENSHHIG00000005493
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 6 NC_047156.1 (25713500..25825855)

Chromosome 6 - NC_047156.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD97 Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene eukaryotic translation initiation factor 4, gamma 2b Neighboring gene neurotensin Neighboring gene Ras association domain family member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047156.1 Chromosome 6 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047156.1 Reference fHipHip1.pri Primary Assembly

    Range
    25713500..25825855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034588632.1 → XP_034444523.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    Related
    ENSHHIP00000014022.1, ENSHHIT00000014326.1
    Conserved Domains (1) summary
    pfam04666
    Location:58 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_034588633.1 → XP_034444524.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    Related
    ENSHHIP00000014021.1, ENSHHIT00000014325.1
    Conserved Domains (1) summary
    pfam04666
    Location:58 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_034588634.1 → XP_034444525.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:58 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  4. XM_034588635.1 → XP_034444526.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:58 → 324
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  5. XM_034588631.1 → XP_034444522.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

    Related
    ENSHHIP00000014020.1, ENSHHIT00000014324.1
    Conserved Domains (1) summary
    pfam04666
    Location:82 → 348
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
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