U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117761542 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117761542, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117761542
Gene description
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like
See related
EnsemblRapid:ENSHHIG00000006197
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117761542 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 5 NC_047155.1 (11590098..11596209)

Chromosome 5 - NC_047155.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 62, tandem duplicate 1 Neighboring gene uncharacterized LOC117760996 Neighboring gene zinc finger protein 362a Neighboring gene coiled-coil domain-containing protein 30 Neighboring gene epithelial membrane protein 3-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047155.1 Chromosome 5 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047155.1 Reference fHipHip1.pri Primary Assembly

    Range
    11590098..11596209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034585534.1 → XP_034441425.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

    Related
    ENSHHIP00000015993.1, ENSHHIT00000016313.1

  2. XM_034585533.1 → XP_034441424.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases