U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hcfc1a host cell factor C1a [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117761086, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
hcfc1a
Gene description
host cell factor C1a
See related
EnsemblRapid:ENSHHIG00000010429
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hcfc1a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 5 NC_047155.1 (23427719..23442293, complement)

Chromosome 5 - NC_047155.1Genomic Context describing neighboring genes Neighboring gene bcl-2-like protein 1 Neighboring gene GATA binding protein 1a Neighboring gene uncharacterized LOC117761096 Neighboring gene blue-sensitive opsin-like Neighboring gene blue-sensitive opsin-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047155.1 Chromosome 5 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
host cell factor 1a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047155.1 Reference fHipHip1.pri Primary Assembly

    Range
    23427719..23442293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034584693.1 → XP_034440584.1  host cell factor 1a isoform X2

    Related
    ENSHHIP00000028365.1, ENSHHIT00000028780.1

  2. XM_034584692.1 → XP_034440583.1  host cell factor 1a isoform X1

    Related
    ENSHHIP00000028357.1, ENSHHIT00000028772.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases