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LOC117760004 torsin-1A-interacting protein 2-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117760004, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117760004
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSHHIG00000008381
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117760004 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 4 NC_047154.1 (11989744..11994143, complement)

Chromosome 4 - NC_047154.1Genomic Context describing neighboring genes Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene ferric-chelate reductase 1 Neighboring gene uncharacterized LOC117760017 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047154.1 Chromosome 4 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047154.1 Reference fHipHip1.pri Primary Assembly

    Range
    11989744..11994143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034582654.1 → XP_034438545.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSHHIP00000022494.1, ENSHHIT00000022903.1

  2. XM_034582652.1 → XP_034438543.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSHHIP00000022495.1, ENSHHIT00000022904.1
Nucleotide Protein
Heading Accession and Version

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