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large1 LARGE xylosyl- and glucuronyltransferase 1 [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117757426, updated on 19-Mar-2024

Summary

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Gene symbol
large1
Gene description
LARGE xylosyl- and glucuronyltransferase 1
See related
EnsemblRapid:ENSHHIG00000017101
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See large1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 23 NC_047173.1 (1906579..2022445, complement)

Chromosome 23 - NC_047173.1Genomic Context describing neighboring genes Neighboring gene protein bicaudal D homolog 1-like Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene uncharacterized LOC117757432 Neighboring gene tubulin beta chain-like Neighboring gene tubulin beta chain-like Neighboring gene transfer RNA proline (anticodon CGG) Neighboring gene transfer RNA proline (anticodon UGG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047173.1 Chromosome 23 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047173.1 Reference fHipHip1.pri Primary Assembly

    Range
    1906579..2022445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034578588.1 → XP_034434479.1  LARGE xylosyl- and glucuronyltransferase 1

    Related
    ENSHHIP00000048018.1, ENSHHIT00000048982.1
    Conserved Domains (3) summary
    cd06431
    Location:137 → 416
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:472 → 741
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl21462
    Location:61 → 83
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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