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st8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117756967, updated on 19-Mar-2024

Summary

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Gene symbol
st8sia1
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
See related
EnsemblRapid:ENSHHIG00000007023
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See st8sia1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 23 NC_047173.1 (12135215..12145991, complement)

Chromosome 23 - NC_047173.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117757659 Neighboring gene uncharacterized LOC117756968 Neighboring gene troponin I, slow skeletal muscle-like Neighboring gene IQ motif and Sec7 domain ArfGEF 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047173.1 Chromosome 23 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylneuraminide alpha-2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047173.1 Reference fHipHip1.pri Primary Assembly

    Range
    12135215..12145991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034577607.1 → XP_034433498.1  alpha-N-acetylneuraminide alpha-2,8-sialyltransferase isoform X1

    Related
    ENSHHIP00000018455.1, ENSHHIT00000018793.1
    Conserved Domains (1) summary
    pfam00777
    Location:72 → 325
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_034577608.1 → XP_034433499.1  alpha-N-acetylneuraminide alpha-2,8-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:21 → 201
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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