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galnt16 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117756418, updated on 19-Mar-2024

Summary

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Gene symbol
galnt16
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
See related
EnsemblRapid:ENSHHIG00000005638
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See galnt16 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 22 NC_047172.1 (3899879..3929086)

Chromosome 22 - NC_047172.1Genomic Context describing neighboring genes Neighboring gene VPS39 subunit of HOPS complex Neighboring gene uncharacterized LOC117756420 Neighboring gene uncharacterized LOC117756421 Neighboring gene NUMB endocytic adaptor protein Neighboring gene uncharacterized LOC117756422 Neighboring gene exonuclease 3'-5' domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047172.1 Chromosome 22 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047172.1 Reference fHipHip1.pri Primary Assembly

    Range
    3899879..3929086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034576930.1 → XP_034432821.1  polypeptide N-acetylgalactosaminyltransferase 16

    Related
    ENSHHIP00000014851.1, ENSHHIT00000015158.1
Nucleotide Protein
Heading Accession and Version

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