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pigm phosphatidylinositol glycan anchor biosynthesis, class M [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117754299, updated on 19-Mar-2024

Summary

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Gene symbol
pigm
Gene description
phosphatidylinositol glycan anchor biosynthesis, class M
See related
EnsemblRapid:ENSHHIG00000002861
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See pigm in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 20 NC_047170.1 (6160796..6167499)

Chromosome 20 - NC_047170.1Genomic Context describing neighboring genes Neighboring gene leukocyte elastase inhibitor-like Neighboring gene leukocyte elastase inhibitor-like Neighboring gene aryl-hydrocarbon receptor repressor a Neighboring gene ankyrin repeat and SAM domain-containing protein 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047170.1 Chromosome 20 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047170.1 Reference fHipHip1.pri Primary Assembly

    Range
    6160796..6167499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034573161.1 → XP_034429052.1  GPI mannosyltransferase 1 isoform X2

  2. XM_034573160.1 → XP_034429051.1  GPI mannosyltransferase 1 isoform X1

    Related
    ENSHHIP00000006442.1, ENSHHIT00000006731.1
Nucleotide Protein
Heading Accession and Version

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