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LOC117753043 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117753043, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117753043
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
See related
EnsemblRapid:ENSHHIG00000019438
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117753043 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 19 NC_047169.1 (13085745..13107420)

Chromosome 19 - NC_047169.1Genomic Context describing neighboring genes Neighboring gene NADPH oxidase organizer 1-like Neighboring gene testis expressed 2, like Neighboring gene methionine sulfoxide reductase B1b Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene meiosis specific with OB-fold Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae) Neighboring gene BRICHOS domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047169.1 Chromosome 19 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047169.1 Reference fHipHip1.pri Primary Assembly

    Range
    13085745..13107420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034570871.1 → XP_034426762.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    Related
    ENSHHIP00000053920.1, ENSHHIT00000055366.1
    Conserved Domains (1) summary
    pfam00685
    Location:114 → 350
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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