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ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117751263, updated on 19-Mar-2024

Summary

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Gene symbol
ppp2r3c
Gene description
protein phosphatase 2, regulatory subunit B'', gamma
See related
Ensembl:ENSCLMG00005010577
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
Orthologs
human zebrafish all
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Genomic context

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See ppp2r3c in Genome Data Viewer
Location:
chromosome: 22
Exon count:
13
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 22 NC_046987.1 (5572754..5576562, complement)

Chromosome 22 - NC_046987.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 7B Neighboring gene family with sequence similarity 177 member A1 Neighboring gene protein only RNase P catalytic subunit Neighboring gene proteasome 20S subunit alpha 6a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046987.1 Chromosome 22 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of B cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046987.1 Reference fCycLum1.pri

    Range
    5572754..5576562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034562992.1 → XP_034418883.1  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma

    UniProtKB/TrEMBL
    A0A8C2XPF1, A0A8C2XRI1
    Related
    ENSCLMP00005021394.1, ENSCLMT00005022456.1
    Conserved Domains (1) summary
    cd21505
    Location:58 → 439
    PPP2R3C; serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma
Nucleotide Protein
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