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LOC117747571 guanine nucleotide-binding protein G(q) subunit alpha-like [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117747571, updated on 9-Nov-2023

Summary

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Gene symbol
LOC117747571
Gene description
guanine nucleotide-binding protein G(q) subunit alpha-like
See related
Ensembl:ENSCLMG00005008578
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
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Genomic context

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See LOC117747571 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 18 NC_046983.1 (1894672..1897802)

Chromosome 18 - NC_046983.1Genomic Context describing neighboring genes Neighboring gene tec protein tyrosine kinase Neighboring gene uncharacterized LOC117747574 Neighboring gene CD276 antigen-like Neighboring gene BRD4-interacting chromatin-remodeling complex-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046983.1 Chromosome 18 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables G-protein beta/gamma-subunit complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipase C-activating dopamine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein G(q) subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046983.1 Reference fCycLum1.pri

    Range
    1894672..1897802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034556921.1 → XP_034412812.1  guanine nucleotide-binding protein G(q) subunit alpha-like

    UniProtKB/TrEMBL
    A0A8C2XH66
    Related
    ENSCLMP00005016631.1, ENSCLMT00005017625.1
    Conserved Domains (1) summary
    cd00066
    Location:40 → 299
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)
Nucleotide Protein
Heading Accession and Version

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