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LOC117746890 dnaJ homolog subfamily B member 6-like [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117746890, updated on 25-Jan-2024

Summary

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Gene symbol
LOC117746890
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
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Genomic context

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See LOC117746890 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 17 NC_046982.1 (397600..405953, complement)

Chromosome 17 - NC_046982.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF31 Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene exocyst complex component 3 Neighboring gene uncharacterized LOC117745990 Neighboring gene bucky ball 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046982.1 Chromosome 17 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046982.1 Reference fCycLum1.pri

    Range
    397600..405953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034556223.1 → XP_034412114.1  dnaJ homolog subfamily B member 6-like

    Conserved Domains (1) summary
    PRK10767
    Location:3 → 140
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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