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mmadhca metabolism of cobalamin associated Da [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117746255, updated on 19-Mar-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
Ensembl:ENSCLMG00005003509
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 2 NC_046967.1 (7003057..7006040, complement)

Chromosome 2 - NC_046967.1Genomic Context describing neighboring genes Neighboring gene paraspeckle component 1 Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene Rho family GTPase 3a Neighboring gene uncharacterized LOC117744821

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046967.1 Chromosome 2 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046967.1 Reference fCycLum1.pri

    Range
    7003057..7006040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034555284.1 → XP_034411175.1  metabolism of cobalamin associated Da

    UniProtKB/TrEMBL
    A0A8C2WQM8
    Related
    ENSCLMP00005006313.1, ENSCLMT00005006803.1
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 290
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_034555293.1 → XP_034411184.1  metabolism of cobalamin associated Da

    UniProtKB/TrEMBL
    A0A8C2WQM8
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 290
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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