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ctbp2a C-terminal binding protein 2a [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117744182, updated on 19-Mar-2024

Summary

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Gene symbol
ctbp2a
Gene description
C-terminal binding protein 2a
See related
Ensembl:ENSCLMG00005020689
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
Orthologs
zebrafish all
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Genomic context

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See ctbp2a in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 15 NC_046980.1 (9139689..9198307, complement)

Chromosome 15 - NC_046980.1Genomic Context describing neighboring genes Neighboring gene EEF1A lysine methyltransferase 2 Neighboring gene abraxas 2, BRISC complex subunit Neighboring gene zinc finger, RAN-binding domain containing 1b Neighboring gene autophagy-related protein 16-1 Neighboring gene testis expressed 36 Neighboring gene erythroid differentiation regulatory factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046980.1 Chromosome 15 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046980.1 Reference fCycLum1.pri

    Range
    9139689..9198307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034552336.1 → XP_034408227.1  C-terminal-binding protein 2a isoform X3

    UniProtKB/TrEMBL
    A0A8C3G9W1
    Related
    ENSCLMP00005044854.1, ENSCLMT00005046429.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_034552334.1 → XP_034408225.1  C-terminal-binding protein 2a isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:612 → 702
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd05299
    Location:766 → 1084
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    pfam09606
    Location:541 → 726
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  3. XM_034552335.1 → XP_034408226.1  C-terminal-binding protein 2a isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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