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lman2lb lectin, mannose-binding 2-like b [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117736662, updated on 19-Jun-2024

Summary

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Gene symbol
lman2lb
Gene description
lectin, mannose-binding 2-like b
See related
Ensembl:ENSCLMG00005002235
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
Orthologs
zebrafish all
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Genomic context

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See lman2lb in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 9 NC_046974.1 (26554049..26560699)

Chromosome 9 - NC_046974.1Genomic Context describing neighboring genes Neighboring gene HtrA serine peptidase 4 Neighboring gene TM2 domain containing 2 Neighboring gene leukocyte surface antigen CD53-like Neighboring gene nuclease SbcCD subunit C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046974.1 Chromosome 9 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lectin, mannose-binding 2-like b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046974.1 Reference fCycLum1.pri

    Range
    26554049..26560699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034542140.1 → XP_034398031.1  lectin, mannose-binding 2-like b isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:56 → 312
    lectin_L-type; legume lectins

  2. XM_034542141.1 → XP_034398032.1  lectin, mannose-binding 2-like b isoform X2

    Conserved Domains (1) summary
    cl14058
    Location:56 → 305
    lectin_L-type; legume lectins

  3. XM_034542143.1 → XP_034398034.1  lectin, mannose-binding 2-like b isoform X4

    UniProtKB/TrEMBL
    A0A8C2WGX9
    Related
    ENSCLMP00005003976.1, ENSCLMT00005004313.1
    Conserved Domains (1) summary
    cl14058
    Location:56 → 305
    lectin_L-type; legume lectins

  4. XM_034542142.1 → XP_034398033.1  lectin, mannose-binding 2-like b isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:56 → 312
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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