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hs3st2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117735141, updated on 19-Mar-2024

Summary

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Gene symbol
hs3st2
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
Orthologs
zebrafish all
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Genomic context

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See hs3st2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 8 NC_046973.1 (5219699..5237658)

Chromosome 8 - NC_046973.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117735714 Neighboring gene heparan sulfate (glucosamine) 3-O-sulfotransferase 4 Neighboring gene ubiquitin specific peptidase 31 Neighboring gene BAI1 associated protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046973.1 Chromosome 8 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046973.1 Reference fCycLum1.pri

    Range
    5219699..5237658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034539605.1 → XP_034395496.1  heparan sulfate glucosamine 3-O-sulfotransferase 2

    Conserved Domains (1) summary
    pfam00685
    Location:123 → 360
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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