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cas6f type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [ Shewanella baltica OS678 ]

Gene ID: 11773415, updated on 15-Apr-2023

Summary

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Gene symbol
cas6f
Gene description
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
Locus tag
SBAL678_RS40430
Gene type
protein coding
Organism
Shewanella baltica OS678 (strain: OS678)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
Old locus tag
Sbal678_3379
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Genomic context

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Sequence:
NC_016901.1 (3932997..3933581, complement)

NC_016901.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene peptide chain release factor 3 Neighboring gene type I-F CRISPR-associated protein Csy3 Neighboring gene type I-F CRISPR-associated protein Csy2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016901.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA. Haurwitz RE, et al. EMBO J, 2012 Jun 13. PMID 22522703, Free PMC Article
  2. Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea. Caro-Quintero A, et al. J Bacteriol, 2012 Mar. PMID 22328742, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type I-F CRISPR-associated endoribonuclease Cas6/Csy4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016901.1 Reference assembly

    Range
    3932997..3933581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012197491.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [Shewanella baltica]

    See identical proteins and their annotated locations for WP_012197491.1

    UniProtKB/TrEMBL
    A9KZ86
    Conserved Domains (1) summary
    cd09739
    Location:1 → 194
    Cas6_I-F; CRISPR/Cas system-associated RAMP superfamily protein Cas6f
Nucleotide Protein
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Gene LinkOut

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Research Materials