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deoA thymidine phosphorylase [ Shewanella baltica OS678 ]

Gene ID: 11773410, updated on 15-Apr-2023

Summary

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Gene symbol
deoA
Gene description
thymidine phosphorylase
Locus tag
SBAL678_RS40395
Gene type
protein coding
Organism
Shewanella baltica OS678 (strain: OS678)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
Old locus tag
Sbal678_3372
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Genomic context

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Sequence:
NC_016901.1 (3921939..3923270, complement)

NC_016901.1Genomic Context describing neighboring genes Neighboring gene phosphopentomutase Neighboring gene purine-nucleoside phosphorylase Neighboring gene deoxyribose-phosphate aldolase Neighboring gene outer membrane protein OmpK

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016901.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substrate specificity of Escherichia coli thymidine phosphorylase for pyrimidine nucleosides with anti-human immunodeficiency virus activity. Schinazi RF, et al. Biochem Pharmacol, 1992 Jul 22. PMID 1322661
  2. Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea. Caro-Quintero A, et al. J Bacteriol, 2012 Mar. PMID 22328742, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
thymidine phosphorylase
WP_006086930.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016901.1 Reference assembly

    Range
    3921939..3923270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_006086930.1 thymidine phosphorylase [Shewanella baltica]

    See identical proteins and their annotated locations for WP_006086930.1

    UniProtKB/Swiss-Prot
    A9KZ79
    Conserved Domains (1) summary
    PRK05820
    Location:1 → 440
    deoA; thymidine phosphorylase; Reviewed
Nucleotide Protein
Heading Accession and Version