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LOC117727462 mitochondrial basic amino acids transporter-like [ Cyclopterus lumpus (lumpfish) ]

Gene ID: 117727462, updated on 9-Nov-2023

Summary

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Gene symbol
LOC117727462
Gene description
mitochondrial basic amino acids transporter-like
See related
Ensembl:ENSCLMG00005020564
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyclopterus lumpus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterus
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Genomic context

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See LOC117727462 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fCycLum1.pri (GCF_009769545.1) 24 NC_046989.1 (5213591..5218803)

Chromosome 24 - NC_046989.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117727006 Neighboring gene solute carrier family 25 member 47a Neighboring gene vertebrae development associated Neighboring gene synapse differentiation inducing 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046989.1 Chromosome 24 Reference fCycLum1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyclopterus lumpus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCycLum1.pri

Genomic

  1. NC_046989.1 Reference fCycLum1.pri

    Range
    5213591..5218803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034527791.1 → XP_034383682.1  mitochondrial basic amino acids transporter-like isoform X1

    UniProtKB/TrEMBL
    A0A8C3AKI4
    Related
    ENSCLMP00005044485.1, ENSCLMT00005046053.1
    Conserved Domains (1) summary
    pfam00153
    Location:87 → 177
    Mito_carr; Mitochondrial carrier protein

  2. XM_034527793.1 → XP_034383684.1  mitochondrial basic amino acids transporter-like isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:24 → 114
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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Molecular Biology Databases