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Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117723030, updated on 19-Mar-2024

Summary

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Gene symbol
Galnt2
Gene description
polypeptide N-acetylgalactosaminyltransferase 2
See related
EnsemblRapid:ENSANLG00005014861
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Galnt2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
16
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 18 NC_047675.1 (49915061..50030341)

Chromosome 18 - NC_047675.1Genomic Context describing neighboring genes Neighboring gene claudin-7-like Neighboring gene cytochrome c oxidase subunit 6C-2-like Neighboring gene piggyBac transposable element derived 5 Neighboring gene component of oligomeric golgi complex 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047675.1 Chromosome 18 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047675.1 Reference mArvNil1.pat.X

    Range
    49915061..50030341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034522389.1 → XP_034378280.1  polypeptide N-acetylgalactosaminyltransferase 2

    Related
    ENSANLP00005018704.1, ENSANLT00005021176.1
    Conserved Domains (2) summary
    cd02510
    Location:138 → 433
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:445 → 562
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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