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Alg12 ALG12 alpha-1,6-mannosyltransferase [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117718595, updated on 19-Mar-2024

Summary

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Gene symbol
Alg12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
EnsemblRapid:ENSANLG00005014487
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Alg12 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 13 NC_047670.1 (63479379..63492849, complement)

Chromosome 13 - NC_047670.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase subunit F-like Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase Neighboring gene tubulin tyrosine ligase like 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047670.1 Chromosome 13 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047670.1 Reference mArvNil1.pat.X

    Range
    63479379..63492849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034516342.1 → XP_034372233.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    Conserved Domains (1) summary
    cl21590
    Location:21 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_034516345.1 → XP_034372236.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    Conserved Domains (1) summary
    cl21590
    Location:21 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_034516344.1 → XP_034372235.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    Related
    ENSANLP00005018251.1, ENSANLT00005020663.1
    Conserved Domains (1) summary
    cl21590
    Location:21 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_034516343.1 → XP_034372234.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    Conserved Domains (1) summary
    cl21590
    Location:21 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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