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Xxylt1 xyloside xylosyltransferase 1 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117718117, updated on 19-Mar-2024

Summary

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Gene symbol
Xxylt1
Gene description
xyloside xylosyltransferase 1
See related
EnsemblRapid:ENSANLG00005014390
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Xxylt1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 12 NC_047669.1 (17618746..17743217, complement)

Chromosome 12 - NC_047669.1Genomic Context describing neighboring genes Neighboring gene proteasome maturation protein-like Neighboring gene small nucleolar RNA SNORA17 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047669.1 Chromosome 12 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047669.1 Reference mArvNil1.pat.X

    Range
    17618746..17743217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034515635.1 → XP_034371526.1  xyloside xylosyltransferase 1

    Related
    ENSANLP00005018120.1, ENSANLT00005020524.1
    Conserved Domains (1) summary
    cl11394
    Location:118 → 381
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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