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Cog5 component of oligomeric golgi complex 5 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117717072, updated on 19-Mar-2024

Summary

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Gene symbol
Cog5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSANLG00005011228
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Cog5 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
22
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 11 NC_047668.1 (34429070..34717654, complement)

Chromosome 11 - NC_047668.1Genomic Context describing neighboring genes Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene U6 spliceosomal RNA Neighboring gene G protein-coupled receptor 22 Neighboring gene dihydrouridine synthase 4 like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047668.1 Chromosome 11 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047668.1 Reference mArvNil1.pat.X

    Range
    34429070..34717654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034514294.1 → XP_034370185.1  conserved oligomeric Golgi complex subunit 5

    Related
    ENSANLP00005014205.1, ENSANLT00005016079.1
    Conserved Domains (1) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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