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Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117716133, updated on 19-Mar-2024

Summary

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Gene symbol
Galnt18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
See related
EnsemblRapid:ENSANLG00005002507
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 1 NC_047658.1 (79247062..79434391, complement)

Chromosome 1 - NC_047658.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD97 Neighboring gene endothelial differentiation-related factor 1-like Neighboring gene eukaryotic translation initiation factor 4 gamma 2 Neighboring gene DNA repair protein SWI5 homolog Neighboring gene ubiquitin specific peptidase 47

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047658.1 Chromosome 1 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047658.1 Reference mArvNil1.pat.X

    Range
    79247062..79434391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034513094.1 → XP_034368985.1  polypeptide N-acetylgalactosaminyltransferase 18

    Related
    ENSANLP00005002899.1, ENSANLT00005003350.1
    Conserved Domains (2) summary
    cd02510
    Location:97 → 398
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:411 → 538
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
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