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Eogt EGF domain specific O-linked N-acetylglucosamine transferase [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117715517, updated on 19-Mar-2024

Summary

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Gene symbol
Eogt
Gene description
EGF domain specific O-linked N-acetylglucosamine transferase
See related
EnsemblRapid:ENSANLG00005013016
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Eogt in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 9 NC_047666.1 (36639441..36669254, complement)

Chromosome 9 - NC_047666.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117715283 Neighboring gene 40S ribosomal protein S15-like Neighboring gene small nucleolar RNA SNORA36 family Neighboring gene TATA element modulatory factor 1 Neighboring gene ubiquitin like modifier activating enzyme 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047666.1 Chromosome 9 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047666.1 Reference mArvNil1.pat.X

    Range
    36639441..36669254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034512366.1 → XP_034368257.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Related
    ENSANLP00005016392.1, ENSANLT00005018576.1
    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)

  2. XM_034512369.1 → XP_034368260.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)

  3. XM_034512367.1 → XP_034368258.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)

  4. XM_034512368.1 → XP_034368259.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)

  5. XM_034512370.1 → XP_034368261.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)

  6. XM_034512371.1 → XP_034368262.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:245 → 469
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
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