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St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117714671, updated on 19-Mar-2024

Summary

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Gene symbol
St8sia1
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
See related
EnsemblRapid:ENSANLG00005022894
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See St8sia1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 9 NC_047666.1 (79789103..79916132, complement)

Chromosome 9 - NC_047666.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase 6B1-like Neighboring gene cytidine monophosphate N-acetylneuraminic acid synthetase Neighboring gene uncharacterized LOC117715385 Neighboring gene C2 calcium dependent domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047666.1 Chromosome 9 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylneuraminide alpha-2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047666.1 Reference mArvNil1.pat.X

    Range
    79789103..79916132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034511246.1 → XP_034367137.1  alpha-N-acetylneuraminide alpha-2,8-sialyltransferase

    Related
    ENSANLP00005028261.1, ENSANLT00005032211.1
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 343
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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