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B3gat1 beta-1,3-glucuronyltransferase 1 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117713612, updated on 19-Mar-2024

Summary

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Gene symbol
B3gat1
Gene description
beta-1,3-glucuronyltransferase 1
See related
EnsemblRapid:ENSANLG00005011267
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See B3gat1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 8 NC_047665.1 (82040539..82067695, complement)

Chromosome 8 - NC_047665.1Genomic Context describing neighboring genes Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene galactosidase beta 1 like 3 Neighboring gene high mobility group protein B1-like Neighboring gene nucleolar transcription factor 1-like Neighboring gene small nucleolar RNA SNORA17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047665.1 Chromosome 8 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047665.1 Reference mArvNil1.pat.X

    Range
    82040539..82067695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034509945.1 → XP_034365836.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    Related
    ENSANLP00005014266.1, ENSANLT00005016146.1
    Conserved Domains (1) summary
    pfam03360
    Location:156 → 366
    Glyco_transf_43; Glycosyltransferase family 43

  2. XM_034509946.1 → XP_034365837.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam03360
    Location:105 → 315
    Glyco_transf_43; Glycosyltransferase family 43
Nucleotide Protein
Heading Accession and Version

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