U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117712740, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Hs3st1
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 1
See related
EnsemblRapid:ENSANLG00005009895
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Hs3st1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 7 NC_047664.1 (44117874..44148337, complement)

Chromosome 7 - NC_047664.1Genomic Context describing neighboring genes Neighboring gene cytokine dependent hematopoietic cell linker Neighboring gene small nucleolar RNA SNORA17 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene RAB28, member RAS oncogene family

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047664.1 Chromosome 7 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047664.1 Reference mArvNil1.pat.X

    Range
    44117874..44148337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034508859.1 → XP_034364750.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    Related
    ENSANLP00005012430.1, ENSANLT00005014066.1
    Conserved Domains (1) summary
    pfam00685
    Location:58 → 295
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.