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Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117711559, updated on 19-Mar-2024

Summary

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Gene symbol
Mgat4b
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B
See related
EnsemblRapid:ENSANLG00005013678
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Mgat4b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 6 NC_047663.1 (70740307..70750146, complement)

Chromosome 6 - NC_047663.1Genomic Context describing neighboring genes Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene rRNA 2'-O-methyltransferase fibrillarin-like Neighboring gene leukotriene C4 synthase Neighboring gene sequestosome 1 Neighboring gene MRN complex interacting protein Neighboring gene TBC1 domain family member 9B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047663.1 Chromosome 6 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047663.1 Reference mArvNil1.pat.X

    Range
    70740307..70750146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034507297.1 → XP_034363188.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

    Related
    ENSANLP00005017262.1, ENSANLT00005019543.1
    Conserved Domains (2) summary
    pfam04666
    Location:110 → 387
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:294 → 314
    PGAP4-like; putative TM2 helix [structural motif]
Nucleotide Protein
Heading Accession and Version

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