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Extl2 exostosin like glycosyltransferase 2 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117707740, updated on 19-Mar-2024

Summary

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Gene symbol
Extl2
Gene description
exostosin like glycosyltransferase 2
See related
EnsemblRapid:ENSANLG00005007635
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Extl2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 4 NC_047661.1 (93986693..94010348)

Chromosome 4 - NC_047661.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117707803 Neighboring gene diphthamide biosynthesis 5 Neighboring gene solute carrier family 30 member 7 Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene small nucleolar RNA SNORA17 Neighboring gene vascular cell adhesion molecule 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047661.1 Chromosome 4 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047661.1 Reference mArvNil1.pat.X

    Range
    93986693..94010348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034501267.1 → XP_034357158.1  exostosin-like 2 isoform X1

    Conserved Domains (1) summary
    pfam09258
    Location:66 → 316
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_034501268.1 → XP_034357159.1  exostosin-like 2 isoform X2

    Conserved Domains (1) summary
    pfam09258
    Location:53 → 303
    Glyco_transf_64; Glycosyl transferase family 64 domain

  3. XM_034501266.1 → XP_034357157.1  exostosin-like 2 isoform X1

    Related
    ENSANLP00005009472.1, ENSANLT00005010778.1
    Conserved Domains (1) summary
    pfam09258
    Location:66 → 316
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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