U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117703066, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Galnt3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
See related
EnsemblRapid:ENSANLG00005003211
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Galnt3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 2 NC_047659.1 (41874833..41912263, complement)

Chromosome 2 - NC_047659.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117703070 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene sodium channel protein type 1 subunit alpha

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047659.1 Chromosome 2 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047659.1 Reference mArvNil1.pat.X

    Range
    41874833..41912263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034494530.1 → XP_034350421.1  polypeptide N-acetylgalactosaminyltransferase 3 isoform X1

    Related
    ENSANLP00005003730.1, ENSANLT00005004301.1
    Conserved Domains (2) summary
    cd02510
    Location:188 → 493
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:506 → 627
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_034494531.1 → XP_034350422.1  polypeptide N-acetylgalactosaminyltransferase 3 isoform X2

    Related
    ENSANLP00005003734.1, ENSANLT00005004305.1
    Conserved Domains (2) summary
    cd02510
    Location:188 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:464 → 583
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.