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Chst14 carbohydrate sulfotransferase 14 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117702605, updated on 19-Mar-2024

Summary

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Gene symbol
Chst14
Gene description
carbohydrate sulfotransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Chst14 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 2 NC_047659.1 (90209195..90211272)

Chromosome 2 - NC_047659.1Genomic Context describing neighboring genes Neighboring gene isovaleryl-CoA dehydrogenase Neighboring gene bromo adjacent homology domain containing 1 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene coiled-coil domain containing 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047659.1 Chromosome 2 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047659.1 Reference mArvNil1.pat.X

    Range
    90209195..90211272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034493707.1 → XP_034349598.1  carbohydrate sulfotransferase 14

    Conserved Domains (1) summary
    pfam03567
    Location:144 → 364
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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