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Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117699123, updated on 19-Mar-2024

Summary

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Gene symbol
Stt3a
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit A
See related
EnsemblRapid:ENSANLG00005024441
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Stt3a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) Unplaced Scaffold NW_023044996.1 (5641978..5673895, complement)

NW_023044996.1Genomic Context describing neighboring genes Neighboring gene acrosomal vesicle protein 1 Neighboring gene checkpoint kinase 1 Neighboring gene small nucleolar RNA SNORA26 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene fasciculation and elongation protein zeta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023044996 Unplaced Scaffold Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NW_023044996.1 Reference mArvNil1.pat.X

    Range
    5641978..5673895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034490903.1 → XP_034346794.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit

  2. XM_034490904.1 → XP_034346795.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    Related
    ENSANLP00005030240.1, ENSANLT00005034436.1
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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