U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Kirrel3 kirre like nephrin family adhesion molecule 3 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117698951, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Kirrel3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Kirrel3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) Unplaced Scaffold NW_023044996.1 (4395735..4529661)

NW_023044996.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA17 Neighboring gene uncharacterized LOC117698950 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023044996 Unplaced Scaffold Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NW_023044996.1 Reference mArvNil1.pat.X

    Range
    4395735..4529661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034490568.1 → XP_034346459.1  kin of IRRE-like protein 3

    Conserved Domains (5) summary
    smart00410
    Location:21 → 110
    IG_like; Immunoglobulin like
    cd00096
    Location:310 → 314
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:116 → 213
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:385 → 482
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:302 → 383
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.