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Ccr8 C-C motif chemokine receptor 8 [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117693781, updated on 19-Mar-2024

Summary

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Gene symbol
Ccr8
Gene description
C-C motif chemokine receptor 8
See related
EnsemblRapid:ENSANLG00005024692
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
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Genomic context

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See Ccr8 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 21 NC_047678.1 (40356325..40359146)

Chromosome 21 - NC_047678.1Genomic Context describing neighboring genes Neighboring gene xin actin binding repeat containing 1 Neighboring gene C-X3-C motif chemokine receptor 1 Neighboring gene solute carrier family 25 member 38 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene ribosomal protein SA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047678.1 Chromosome 21 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C chemokine receptor type 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047678.1 Reference mArvNil1.pat.X

    Range
    40356325..40359146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034484530.1 → XP_034340421.1  C-C chemokine receptor type 8

    Related
    ENSANLP00005030529.1, ENSANLT00005034759.1
    Conserved Domains (1) summary
    cd15187
    Location:34 → 309
    7tmA_CCR8; CC chemokine receptor type 8, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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