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LOC117684937 acetylcholine receptor subunit alpha-like [ Magallana gigas (Pacific oyster) ]

Gene ID: 117684937, discontinued on 2-Jul-2024
  • This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.

Summary

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Gene symbol
LOC117684937
Gene description
acetylcholine receptor subunit alpha-like
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Magallana gigas
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
Summary
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.
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Genomic context

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See LOC117684937 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly LG Location
102 latest, but not current cgigas_uk_roslin_v1 (GCF_902806645.1) 10 NC_047568.1 (46292358..46294709, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047568.1 Chromosome 10 Reference cgigas_uk_roslin_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
acetylcholine receptor subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea gigas Annotation Release 102 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cgigas_uk_roslin_v1

Genomic

  1. NC_047568.1 Reference cgigas_uk_roslin_v1

    Range
    46292358..46294709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034459049.1 → XP_034314940.1  

    Conserved Domains (3) summary
    PTZ00121
    Location:329 → 390
    PTZ00121; MAEBL; Provisional
    cd18989
    Location:58 → 238
    LGIC_ECD_cation; extracellular domain (LBD) of cationic Cys-loop neurotransmitter-gated ion channels
    cd19051
    Location:249 → 328
    LGIC_TM_cation; transmembrane domain of Cys-loop neurotransmitter-gated ion channels, includes 5HT3, nAChR, and ZAC

Gene LinkOut

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Molecular Biology Databases