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GOLPH3 golgi phosphoprotein 3 [ Pantherophis guttatus ]

Gene ID: 117680013, updated on 19-Mar-2024

Summary

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Gene symbol
GOLPH3
Gene description
golgi phosphoprotein 3
See related
EnsemblRapid:ENSPGUG00005004354
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See GOLPH3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844028.1 (88022871..88051102)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010892.1 (2231973..2260101)

NW_026844028.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA66 Neighboring gene zinc finger RNA binding protein Neighboring gene myotubularin related protein 12 Neighboring gene uncharacterized LOC117680039 Neighboring gene PDZ domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi vesicle budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi phosphoprotein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844028.1 Reference CU_Pguttatus_1

    Range
    88022871..88051102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034442436.2 → XP_034298327.1  Golgi phosphoprotein 3

    UniProtKB/TrEMBL
    A0A6P9DRB9
    Related
    ENSPGUP00005006011.1
    Conserved Domains (1) summary
    pfam05719
    Location:66 → 275
    GPP34; Golgi phosphoprotein 3 (GPP34)
Nucleotide Protein
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