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MANBA mannosidase beta [ Pantherophis guttatus ]

Gene ID: 117679891, updated on 19-Mar-2024

Summary

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Gene symbol
MANBA
Gene description
mannosidase beta
See related
EnsemblRapid:ENSPGUG00005014891
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See MANBA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844017.1 (87990672..88047935)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010891.1 (1315258..1371055, complement)

NW_026844017.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117679898 Neighboring gene CDGSH iron sulfur domain 2 Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene solute carrier family 39 member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844017.1 Reference CU_Pguttatus_1

    Range
    87990672..88047935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034442187.2 → XP_034298078.1  beta-mannosidase

    UniProtKB/TrEMBL
    A0A6P9DQV2
    Related
    ENSPGUP00005021100.1
    Conserved Domains (3) summary
    cl30613
    Location:25 → 711
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam17753
    Location:814 → 890
    Ig_mannosidase; Ig-fold domain
    pfam17786
    Location:717 → 808
    Mannosidase_ig; Mannosidase Ig/CBM-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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