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ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [ Pantherophis guttatus ]

Gene ID: 117679094, updated on 19-Mar-2024

Summary

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Gene symbol
ST8SIA4
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
See related
EnsemblRapid:ENSPGUG00005016153
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See ST8SIA4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844028.1 (62104336..62272889)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010881.1 (23416193..23526891, complement)

NW_026844028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132711405 Neighboring gene uncharacterized LOC132711406 Neighboring gene family with sequence similarity 174 member A Neighboring gene uncharacterized LOC117679117

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844028.1 Reference CU_Pguttatus_1

    Range
    62104336..62272889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060690609.1 → XP_060546592.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X3

  2. XM_034440740.2 → XP_034296631.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A6P9DVR4
    Related
    ENSPGUP00005022795.1
    Conserved Domains (1) summary
    pfam00777
    Location:94 → 353
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_034440741.2 → XP_034296632.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A6P9DLF9
    Conserved Domains (1) summary
    pfam00777
    Location:47 → 306
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_034440743.1 → XP_034296634.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A6P9DLB7
    Conserved Domains (1) summary
    pfam00777
    Location:24 → 283
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

RNA

  1. XR_009622352.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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