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GFRA1 GDNF family receptor alpha 1 [ Pantherophis guttatus ]

Gene ID: 117678731, updated on 19-Mar-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
EnsemblRapid:ENSPGUG00005018269
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844092.1 (16205487..16473659)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010877.1 (45259409..45527610, complement)

NW_026844092.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein Q-like Neighboring gene coiled-coil domain containing 172 Neighboring gene attractin like 1 Neighboring gene uncharacterized LOC132709432 Neighboring gene FHF complex subunit HOOK interacting protein 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844092.1 Reference CU_Pguttatus_1

    Range
    16205487..16473659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034440214.2 → XP_034296105.1  GDNF family receptor alpha-1

    UniProtKB/TrEMBL
    A0A6P9DYF6
    Related
    ENSPGUP00005025869.1
    Conserved Domains (2) summary
    smart00907
    Location:153 → 232
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:242 → 336
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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