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DGKD diacylglycerol kinase delta [ Pantherophis guttatus ]

Gene ID: 117678534, updated on 18-Sep-2024

Summary

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Gene symbol
DGKD
Gene description
diacylglycerol kinase delta
See related
EnsemblRapid:ENSPGUG00005015018
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See DGKD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844092.1 (28120875..28182319, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010877.1 (33621891..33682801)

NW_026844092.1Genomic Context describing neighboring genes Neighboring gene coagulation factor X-like Neighboring gene vitamin K-dependent protein C Neighboring gene uncharacterized LOC117678533 Neighboring gene S-antigen visual arrestin Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844092.1 Reference CU_Pguttatus_1

    Range
    28120875..28182319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034439742.2 → XP_034295633.1  diacylglycerol kinase delta isoform X2

    UniProtKB/TrEMBL
    A0A6P9DI70
    Related
    ENSPGUP00005021353.1
    Conserved Domains (6) summary
    cd09575
    Location:1084 → 1148
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:707 → 864
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:263 → 385
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd13274
    Location:1 → 91
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain
    cd20847
    Location:80 → 164
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:171 → 231
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins

  2. XM_034439741.2 → XP_034295632.1  diacylglycerol kinase delta isoform X1

    UniProtKB/TrEMBL
    A0A6P9DIP8
    Conserved Domains (5) summary
    cd09575
    Location:1011 → 1075
    SAM_DGK-delta; SAM domain of diacylglycerol kinase delta
    smart00045
    Location:634 → 791
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:190 → 312
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd20847
    Location:7 → 91
    C1_DGKdelta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
    cd20893
    Location:98 → 158
    C1_DGKdelta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase delta (DAG kinase delta) and similar proteins
Nucleotide Protein
Heading Accession and Version

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