U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLCH1 phospholipase C eta 1 [ Pantherophis guttatus ]

Gene ID: 117678260, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PLCH1
Gene description
phospholipase C eta 1
See related
EnsemblRapid:ENSPGUG00005015081
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PLCH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844092.1 (45021210..45154714, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010877.1 (16659224..16794965)

NW_026844092.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117678807 Neighboring gene membrane primary amine oxidase-like Neighboring gene chromosome unknown C3orf33 homolog Neighboring gene uncharacterized LOC117678259 Neighboring gene solute carrier family 33 member 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844092.1 Reference CU_Pguttatus_1

    Range
    45021210..45154714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034439165.2 → XP_034295056.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X4

    UniProtKB/TrEMBL
    A0A6P9DRL0
    Related
    ENSPGUP00005021370.1
    Conserved Domains (4) summary
    PLN02228
    Location:239 → 885
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:158 → 298
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:310 → 714
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:34 → 140
    PH-like; Pleckstrin homology-like domain

  2. XM_060683008.1 → XP_060538991.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X4

    UniProtKB/TrEMBL
    A0A6P9DRL0

  3. XM_034439164.2 → XP_034295055.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X3

    UniProtKB/TrEMBL
    A0A6P9DVH7
    Related
    ENSPGUP00005021418.1
    Conserved Domains (4) summary
    PLN02228
    Location:287 → 902
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:206 → 346
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:358 → 762
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:82 → 188
    PH-like; Pleckstrin homology-like domain

  4. XM_034439163.2 → XP_034295054.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X2

    UniProtKB/TrEMBL
    A0A6P9DHG0
    Conserved Domains (4) summary
    PLN02228
    Location:287 → 933
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:206 → 346
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:358 → 762
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:82 → 188
    PH-like; Pleckstrin homology-like domain

  5. XM_034439161.2 → XP_034295052.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X1

    UniProtKB/TrEMBL
    A0A6P9DH79
    Conserved Domains (4) summary
    PLN02228
    Location:287 → 933
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:206 → 346
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:358 → 762
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:82 → 188
    PH-like; Pleckstrin homology-like domain

  6. XM_034439166.2 → XP_034295057.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X5

    UniProtKB/TrEMBL
    A0A6P9DH82
    Related
    ENSPGUP00005021459.1
    Conserved Domains (4) summary
    PLN02228
    Location:227 → 873
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:146 → 286
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:298 → 702
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:22 → 128
    PH-like; Pleckstrin homology-like domain

  7. XM_034439167.2 → XP_034295058.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X6

    UniProtKB/TrEMBL
    A0A6P9DHG3
    Conserved Domains (4) summary
    PLN02228
    Location:287 → 933
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:206 → 346
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:358 → 762
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:82 → 188
    PH-like; Pleckstrin homology-like domain

  8. XM_034439168.2 → XP_034295059.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X6

    UniProtKB/TrEMBL
    A0A6P9DHG3
    Conserved Domains (4) summary
    PLN02228
    Location:287 → 933
    PLN02228; Phosphoinositide phospholipase C
    cl28895
    Location:206 → 346
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    cl14615
    Location:358 → 762
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    cl17171
    Location:82 → 188
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.