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ZBTB6 zinc finger and BTB domain containing 6 [ Pantherophis guttatus ]

Gene ID: 117678052, updated on 19-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
See related
EnsemblRapid:ENSPGUG00005015508
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844104.1 (898012..904243, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010873.1 (1404206..1408628, complement)

NW_026844104.1Genomic Context describing neighboring genes Neighboring gene prostaglandin-endoperoxide synthase 1 Neighboring gene phosducin like Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene uncharacterized LOC117678055 Neighboring gene G protein-coupled receptor 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844104.1 Reference CU_Pguttatus_1

    Range
    898012..904243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034438744.2 → XP_034294635.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P9DGI7
    Conserved Domains (3) summary
    COG5048
    Location:212 → 399
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)

  2. XM_034438743.2 → XP_034294634.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P9DGI7
    Conserved Domains (3) summary
    COG5048
    Location:212 → 399
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)

  3. XM_060684076.1 → XP_060540059.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A6P9DGI7
Nucleotide Protein
Heading Accession and Version

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