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CHST7 carbohydrate sulfotransferase 7 [ Pantherophis guttatus ]

Gene ID: 117673773, updated on 19-Mar-2024

Summary

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Gene symbol
CHST7
Gene description
carbohydrate sulfotransferase 7
See related
EnsemblRapid:ENSPGUG00005010605
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See CHST7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844017.1 (39407193..39420452)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010816.1 (3497852..3511113)

NW_026844017.1Genomic Context describing neighboring genes Neighboring gene cytoplasmic FMR1 interacting protein 1 Neighboring gene tubulin gamma complex component 5 Neighboring gene solute carrier family 9 member A7 Neighboring gene uncharacterized LOC117673775 Neighboring gene RP2 activator of ARL3 GTPase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844017.1 Reference CU_Pguttatus_1

    Range
    39407193..39420452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034431394.2 → XP_034287285.1  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A6P9D6U8
    Related
    ENSPGUP00005015012.1
    Conserved Domains (1) summary
    cl21551
    Location:353 → 477
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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