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SFTPC surfactant protein C [ Pantherophis guttatus ]

Gene ID: 117673308, updated on 19-Mar-2024

Summary

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Gene symbol
SFTPC
Gene description
surfactant protein C
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See SFTPC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844095.1 (879344..885092)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010805.1 (1543111..1548777, complement)

NW_026844095.1Genomic Context describing neighboring genes Neighboring gene SREBP regulating gene protein-like Neighboring gene leucine rich repeat LGI family member 3 Neighboring gene pulmonary surfactant-associated protein C-like Neighboring gene Ras association domain family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory gaseous exchange by respiratory system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in alveolar lamellar body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844095.1 Reference CU_Pguttatus_1

    Range
    879344..885092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034430616.2 → XP_034286507.1  pulmonary surfactant-associated protein C

    UniProtKB/TrEMBL
    A0A6P9CTL6
    Conserved Domains (1) summary
    smart00019
    Location:7 → 195
    SF_P; Pulmonary surfactant proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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