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GCNT2 glucosaminyl (N-acetyl) transferase 2 (I blood group) [ Pantherophis guttatus ]

Gene ID: 117672478, updated on 19-Mar-2024

Summary

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Gene symbol
GCNT2
Gene description
glucosaminyl (N-acetyl) transferase 2 (I blood group)
See related
EnsemblRapid:ENSPGUG00005005489
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See GCNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844077.1 (68196390..68213223, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010796.1 (4653151..4670032)

NW_026844077.1Genomic Context describing neighboring genes Neighboring gene male germ cell associated kinase Neighboring gene transmembrane protein 14C-like Neighboring gene uncharacterized LOC132709174 Neighboring gene uncharacterized LOC117672477 Neighboring gene transcription factor AP-2 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844077.1 Reference CU_Pguttatus_1

    Range
    68196390..68213223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034429127.2 → XP_034285018.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

    UniProtKB/TrEMBL
    A0A6P9CKN2
    Related
    ENSPGUP00005007536.1
    Conserved Domains (1) summary
    pfam02485
    Location:106 → 366
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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