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PIGF phosphatidylinositol glycan anchor biosynthesis class F [ Pantherophis guttatus ]

Gene ID: 117671619, updated on 19-Mar-2024

Summary

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Gene symbol
PIGF
Gene description
phosphatidylinositol glycan anchor biosynthesis class F
See related
EnsemblRapid:ENSPGUG00005017789
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See PIGF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844038.1 (55014991..55036866, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010793.1 (12128088..12149911)

NW_026844038.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 247-like Neighboring gene uncharacterized LOC132711991 Neighboring gene ras homolog family member Q Neighboring gene GTP cyclohydrolase 1-like Neighboring gene CXXC repeat containing interactor of PDZ3 domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan biosynthesis class F protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844038.1 Reference CU_Pguttatus_1

    Range
    55014991..55036866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034427641.2 → XP_034283532.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F

  2. XM_034427639.2 → XP_034283530.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F

  3. XM_034427640.2 → XP_034283531.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Related
    ENSPGUP00005025084.1
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F

  4. XM_034427636.2 → XP_034283527.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F

  5. XM_034427637.2 → XP_034283528.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F

  6. XM_034427635.2 → XP_034283526.1  phosphatidylinositol-glycan biosynthesis class F protein

    UniProtKB/TrEMBL
    A0A6P9CVC6
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 203
    PIG-F; GPI biosynthesis protein family Pig-F
Nucleotide Protein
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