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GPD2 glycerol-3-phosphate dehydrogenase 2 [ Pantherophis guttatus ]

Gene ID: 117670303, updated on 11-Apr-2024

Summary

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Gene symbol
GPD2
Gene description
glycerol-3-phosphate dehydrogenase 2
See related
EnsemblRapid:ENSPGUG00005007608
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See GPD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844021.1 (108165733..108262927)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010694.1 (24513685..24610935)

NW_026844021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117670271 Neighboring gene uncharacterized LOC132710640 Neighboring gene nuclear receptor subfamily 4 group A member 2 Neighboring gene uncharacterized LOC117674742 Neighboring gene uncharacterized LOC117670347

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844021.1 Reference CU_Pguttatus_1

    Range
    108165733..108262927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034425362.2 → XP_034281253.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P9CAL6
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 598
    DAO; FAD dependent oxidoreductase

  2. XM_034425370.2 → XP_034281261.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P9CAL6
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 598
    DAO; FAD dependent oxidoreductase

  3. XM_034425377.2 → XP_034281268.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P9CAL6
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 598
    DAO; FAD dependent oxidoreductase

  4. XM_034425386.2 → XP_034281277.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P9CAL6
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 598
    DAO; FAD dependent oxidoreductase

  5. XM_034425394.2 → XP_034281285.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P9CAL6
    Related
    ENSPGUP00005010627.1
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 598
    DAO; FAD dependent oxidoreductase

  6. XM_034425401.2 → XP_034281292.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P9CD91
    Conserved Domains (2) summary
    cd00051
    Location:492 → 554
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:1 → 464
    DAO; FAD dependent oxidoreductase
Nucleotide Protein
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