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B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 [ Pantherophis guttatus ]

Gene ID: 117665010, updated on 19-Mar-2024

Summary

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Gene symbol
B4GALNT2
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See B4GALNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844035.1 (4157879..4180461)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010717.1 (4105294..4127739)

NW_026844035.1Genomic Context describing neighboring genes Neighboring gene ABI family member 3 Neighboring gene G protein subunit gamma transducin 2 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene gastric inhibitory polypeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2
Names
beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844035.1 Reference CU_Pguttatus_1

    Range
    4157879..4180461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034416544.1 → XP_034272435.1  beta-1,4 N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A6P9BY74
    Conserved Domains (2) summary
    pfam00535
    Location:396 → 509
    Glycos_transf_2; Glycosyl transferase family 2
    pfam07727
    Location:13 → 135
    RVT_2; Reverse transcriptase (RNA-dependent DNA polymerase)
Nucleotide Protein
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