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PGAP3 post-GPI attachment to proteins phospholipase 3 [ Pantherophis guttatus ]

Gene ID: 117664670, updated on 19-Mar-2024

Summary

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Gene symbol
PGAP3
Gene description
post-GPI attachment to proteins phospholipase 3
See related
EnsemblRapid:ENSPGUG00005000656
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See PGAP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844035.1 (11386991..11415675)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010717.1 (11331441..11356556)

NW_026844035.1Genomic Context describing neighboring genes Neighboring gene migration and invasion enhancer 1 Neighboring gene erb-b2 receptor tyrosine kinase 2 Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene titin-cap

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844035.1 Reference CU_Pguttatus_1

    Range
    11386991..11415675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034415834.2 → XP_034271725.1  post-GPI attachment to proteins factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P9BVX9
    Related
    ENSPGUP00005000822.1
    Conserved Domains (1) summary
    pfam04080
    Location:57 → 308
    Per1; Per1-like family

  2. XM_034415835.2 → XP_034271726.1  post-GPI attachment to proteins factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P9BUY1
    Conserved Domains (1) summary
    pfam04080
    Location:57 → 298
    Per1; Per1-like family

  3. XM_034415836.2 → XP_034271727.1  post-GPI attachment to proteins factor 3 isoform X3

    UniProtKB/TrEMBL
    A0A6P9BKE6
    Conserved Domains (1) summary
    cl02172
    Location:57 → 190
    Per1; Per1-like family
Nucleotide Protein
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